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yitD [2018-09-14 17:24:17]
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yitD [2018-09-14 17:24:17]

putative PSL synthase
locus
BSU10950
pI
4.38
mw
28.21 kDa
protein length
252 aa Sequence Blast
gene length
756 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
  • Gene

    Coordinates
    1,173,333 → 1,174,091

    The protein

    Structure

  • [PDB|1U83]
  • Expression and Regulation

    Operons

    genes
    [gene|FA7147930DA90604BE2B4837A8A4393F72498AB1|yitC]-[gene|97156E7227E298B0DECC9AAC1411D0DAF3420C29|yitD]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|15383836], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]
  • [protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]: sigma factor, [Pubmed|15699190,15383836], in [regulon|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK regulon]
  • regulation

  • expressed during [SW|sporulation] in the mother cell ([protein|search|SigE], [protein|search|SigK]) [Pubmed|15699190,15383836]
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    Biological materials

    Mutant

  • MGNA-B178 (yitD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1177 NBRP B. subtilis, Japan]
  • BKE10950 (Δ[gene|97156E7227E298B0DECC9AAC1411D0DAF3420C29|yitD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE10950 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGGCAATTCTAGTGAAAAAT, downstream forward: _UP4_TAAAATAGCGGCTGCGGGGC
  • BKK10950 (Δ[gene|97156E7227E298B0DECC9AAC1411D0DAF3420C29|yitD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK10950 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGGCAATTCTAGTGAAAAAT, downstream forward: _UP4_TAAAATAGCGGCTGCGGGGC
  • References

  • 15699190,15383836